Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AC098850.1-201ENST00000419919 790 ntBASIC16.57■□□□□ 0.24
LMO3Q8TAP4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 MEP1AP4-201ENST00000423244 1087 ntBASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AL353779.1-201ENST00000434793 351 ntBASIC16.57■□□□□ 0.24
LMO3Q8TAP4 BCRP1-201ENST00000444246 691 ntBASIC16.57■□□□□ 0.24
LMO3Q8TAP4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 TSPY16P-201ENST00000449843 468 ntBASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AC093004.1-201ENST00000508850 424 ntBASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AL049840.4-201ENST00000602422 811 ntBASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AC107373.2-201ENST00000607735 490 ntBASIC16.57■□□□□ 0.24
LMO3Q8TAP4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AC009118.2-201ENST00000613275 655 ntBASIC16.57■□□□□ 0.24
LMO3Q8TAP4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 CROCCP1-201ENST00000426910 5675 ntBASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 AP002414.2-201ENST00000591780 3365 ntBASIC16.57■□□□□ 0.24
LMO3Q8TAP4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 AL360270.3-201ENST00000609118 1348 ntBASIC16.56■□□□□ 0.24
LMO3Q8TAP4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 VDAC1P7-201ENST00000462417 847 ntBASIC16.56■□□□□ 0.24
LMO3Q8TAP4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 SPCS2P1-201ENST00000561636 679 ntBASIC16.56■□□□□ 0.24
LMO3Q8TAP4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 AL096865.1-201ENST00000606796 927 ntBASIC16.56■□□□□ 0.24
LMO3Q8TAP4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 AL138799.1-201ENST00000448213 1675 ntBASIC16.56■□□□□ 0.24
LMO3Q8TAP4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.56■□□□□ 0.24
LMO3Q8TAP4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 AC106881.1-201ENST00000605849 3329 ntBASIC16.55■□□□□ 0.24
LMO3Q8TAP4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms