Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 C8orf49-201ENST00000525043 1968 ntBASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 AC136759.1-202ENST00000530858 2194 ntBASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 HSPA7-201ENST00000445535 1927 ntBASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFWD2Q8NHY2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 CICP11-201ENST00000434745 2827 ntBASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 RNA5SP419-201ENST00000515908 135 ntBASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 RNA5SP415-201ENST00000517246 115 ntBASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 UNC93B6-202ENST00000528242 690 ntBASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms