Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CAP2P1-201ENST00000557743 1390 ntBASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AL645933.1-201ENST00000440087 609 ntBASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AC012044.1-201ENST00000603431 297 ntBASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 AL137783.1-201ENST00000623494 1896 ntBASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 AC006453.1-201ENST00000636037 1257 ntBASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC14.24□□□□□ -0.13
COL27A1Q8IZC6 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 CICP13-201ENST00000422015 2789 ntBASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 AC019193.1-201ENST00000506678 823 ntBASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 AL360270.3-201ENST00000609118 1348 ntBASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms