Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 AC010319.3-201ENST00000597028 470 ntBASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM4Q86VH4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 AC015936.2-201ENST00000593177 259 ntBASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 AL138799.1-201ENST00000448213 1675 ntBASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM4Q86VH4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms