Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 KRT18P3-201ENST00000451602 1288 ntBASIC14.14□□□□□ -0.15
SHFQ7M4L6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 RN7SL589P-201ENST00000481268 310 ntBASIC14.14□□□□□ -0.15
SHFQ7M4L6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 AL135744.1-201ENST00000565098 629 ntBASIC14.14□□□□□ -0.15
SHFQ7M4L6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 FAM197Y3-203ENST00000618346 717 ntBASIC14.14□□□□□ -0.15
SHFQ7M4L6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHFQ7M4L6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 MROH4P-201ENST00000431302 1578 ntBASIC14.13□□□□□ -0.15
SHFQ7M4L6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHFQ7M4L6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHFQ7M4L6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHFQ7M4L6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHFQ7M4L6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 FAM220BP-201ENST00000377689 816 ntBASIC14.13□□□□□ -0.15
SHFQ7M4L6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHFQ7M4L6 AL355306.1-201ENST00000415580 579 ntBASIC14.13□□□□□ -0.15
SHFQ7M4L6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 RNA5SP410-201ENST00000516285 106 ntBASIC14.13□□□□□ -0.15
SHFQ7M4L6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHFQ7M4L6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHFQ7M4L6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHFQ7M4L6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHFQ7M4L6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SHFQ7M4L6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHFQ7M4L6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SHFQ7M4L6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.12□□□□□ -0.15
SHFQ7M4L6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SHFQ7M4L6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SHFQ7M4L6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.12□□□□□ -0.15
SHFQ7M4L6 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 ZBED1P1-201ENST00000502364 1930 ntBASIC14.12□□□□□ -0.15
SHFQ7M4L6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SHFQ7M4L6 AC140479.7-201ENST00000636301 2332 ntBASIC14.12□□□□□ -0.15
SHFQ7M4L6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
SHFQ7M4L6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.12□□□□□ -0.15
SHFQ7M4L6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SHFQ7M4L6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHFQ7M4L6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms