Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 KRT8P22-201ENST00000562317 1415 ntBASIC16.82■□□□□ 0.28
SNRPFP62306 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.82■□□□□ 0.28
SNRPFP62306 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPFP62306 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPFP62306 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPFP62306 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNRPFP62306 C1QBPP1-201ENST00000400117 770 ntBASIC16.82■□□□□ 0.28
SNRPFP62306 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.82■□□□□ 0.28
SNRPFP62306 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.82■□□□□ 0.28
SNRPFP62306 AC124283.3-201ENST00000570869 594 ntBASIC16.82■□□□□ 0.28
SNRPFP62306 AC133539.2-201ENST00000604757 467 ntBASIC16.82■□□□□ 0.28
SNRPFP62306 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPFP62306 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPFP62306 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
SNRPFP62306 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
SNRPFP62306 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.82■□□□□ 0.28
SNRPFP62306 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.82■□□□□ 0.28
SNRPFP62306 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNRPFP62306 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPFP62306 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPFP62306 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPFP62306 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SNRPFP62306 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPFP62306 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SNRPFP62306 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPFP62306 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPFP62306 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRPFP62306 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRPFP62306 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.81■□□□□ 0.28
SNRPFP62306 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRPFP62306 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 SOCS2P1-201ENST00000417727 557 ntBASIC16.81■□□□□ 0.28
SNRPFP62306 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRPFP62306 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.81■□□□□ 0.28
SNRPFP62306 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRPFP62306 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.81■□□□□ 0.28
SNRPFP62306 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.81■□□□□ 0.28
SNRPFP62306 AC190387.1-201ENST00000551683 408 ntBASIC16.81■□□□□ 0.28
SNRPFP62306 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.81■□□□□ 0.28
SNRPFP62306 SPDYE22P-201ENST00000582158 798 ntBASIC16.81■□□□□ 0.28
SNRPFP62306 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.81■□□□□ 0.28
SNRPFP62306 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.81■□□□□ 0.28
SNRPFP62306 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.81■□□□□ 0.28
SNRPFP62306 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SNRPFP62306 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SNRPFP62306 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SNRPFP62306 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SNRPFP62306 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SNRPFP62306 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPFP62306 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SNRPFP62306 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRPFP62306 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRPFP62306 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRPFP62306 AL360270.3-201ENST00000609118 1348 ntBASIC16.8■□□□□ 0.28
SNRPFP62306 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRPFP62306 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.8■□□□□ 0.28
SNRPFP62306 AC098850.1-201ENST00000419919 790 ntBASIC16.8■□□□□ 0.28
SNRPFP62306 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRPFP62306 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.8■□□□□ 0.28
SNRPFP62306 ELK1P1-201ENST00000485699 580 ntBASIC16.8■□□□□ 0.28
SNRPFP62306 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.8■□□□□ 0.28
SNRPFP62306 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.8■□□□□ 0.28
SNRPFP62306 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRPFP62306 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.8■□□□□ 0.28
SNRPFP62306 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRPFP62306 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRPFP62306 BX539320.1-201ENST00000623759 877 ntBASIC16.8■□□□□ 0.28
SNRPFP62306 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRPFP62306 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 AGAP7P-201ENST00000582299 2062 ntBASIC16.8■□□□□ 0.28
SNRPFP62306 AGAP14-201ENST00000624701 2060 ntBASIC16.8■□□□□ 0.28
SNRPFP62306 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRPFP62306 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms