Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CLCN4P51793 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CLCN4P51793 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLCN4P51793 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN4P51793 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLCN4P51793 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN4P51793 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN4P51793 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN4P51793 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.24■□□□□ 0.19
CLCN4P51793 BX284668.4-201ENST00000453917 508 ntBASIC16.24■□□□□ 0.19
CLCN4P51793 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.24■□□□□ 0.19
CLCN4P51793 RNA5SP423-201ENST00000517127 109 ntBASIC16.24■□□□□ 0.19
CLCN4P51793 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.24■□□□□ 0.19
CLCN4P51793 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN4P51793 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN4P51793 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.24■□□□□ 0.19
CLCN4P51793 AC106872.11-201ENST00000605838 421 ntBASIC16.24■□□□□ 0.19
CLCN4P51793 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.24■□□□□ 0.19
CLCN4P51793 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN4P51793 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN4P51793 AC069224.1-201ENST00000566372 1715 ntBASIC16.24■□□□□ 0.19
CLCN4P51793 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 AC018735.1-201ENST00000437208 1502 ntBASIC16.24■□□□□ 0.19
CLCN4P51793 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CLCN4P51793 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN4P51793 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN4P51793 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLCN4P51793 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN4P51793 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN4P51793 PCDHA1-201ENST00000378133 2726 ntBASIC16.23■□□□□ 0.19
CLCN4P51793 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN4P51793 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 AC008894.3-201ENST00000624324 3103 ntBASIC16.23■□□□□ 0.19
CLCN4P51793 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN4P51793 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 AC092506.1-202ENST00000401022 528 ntBASIC16.23■□□□□ 0.19
CLCN4P51793 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
CLCN4P51793 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.23■□□□□ 0.19
CLCN4P51793 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.23■□□□□ 0.19
CLCN4P51793 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.23■□□□□ 0.19
CLCN4P51793 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN4P51793 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN4P51793 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CLCN4P51793 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLCN4P51793 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN4P51793 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN4P51793 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 AC020914.3-201ENST00000594712 304 ntBASIC16.23■□□□□ 0.19
CLCN4P51793 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN4P51793 AC022188.1-201ENST00000620960 1664 ntBASIC16.23■□□□□ 0.19
CLCN4P51793 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLCN4P51793 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 LRRC59-203ENST00000576448 1531 ntBASIC16.23■□□□□ 0.19
CLCN4P51793 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLCN4P51793 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
CLCN4P51793 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN4P51793 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CLCN4P51793 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN4P51793 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLCN4P51793 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN4P51793 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms