Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CD40P25942 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.38□□□□□ -0.27
CD40P25942 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.38□□□□□ -0.27
CD40P25942 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.38□□□□□ -0.27
CD40P25942 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 AP005482.1-201ENST00000563722 1273 ntBASIC13.38□□□□□ -0.27
CD40P25942 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.38□□□□□ -0.27
CD40P25942 BX539320.1-201ENST00000623759 877 ntBASIC13.38□□□□□ -0.27
CD40P25942 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 CICP13-201ENST00000422015 2789 ntBASIC13.38□□□□□ -0.27
CD40P25942 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40P25942 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40P25942 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40P25942 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40P25942 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CD40P25942 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CD40P25942 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CD40P25942 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.37□□□□□ -0.27
CD40P25942 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CD40P25942 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CD40P25942 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CD40P25942 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.37□□□□□ -0.27
CD40P25942 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.37□□□□□ -0.27
CD40P25942 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 MSTO2P-201ENST00000314835 1709 ntBASIC13.37□□□□□ -0.27
CD40P25942 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.37□□□□□ -0.27
CD40P25942 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CD40P25942 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.37□□□□□ -0.27
CD40P25942 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.37□□□□□ -0.27
CD40P25942 AC022137.2-201ENST00000503482 481 ntBASIC13.37□□□□□ -0.27
CD40P25942 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.37□□□□□ -0.27
CD40P25942 AC104989.1-201ENST00000519711 778 ntBASIC13.37□□□□□ -0.27
CD40P25942 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.37□□□□□ -0.27
CD40P25942 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.37□□□□□ -0.27
CD40P25942 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.37□□□□□ -0.27
CD40P25942 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.37□□□□□ -0.27
CD40P25942 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.37□□□□□ -0.27
CD40P25942 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.37□□□□□ -0.27
CD40P25942 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 AC133552.6-201ENST00000613406 534 ntBASIC13.37□□□□□ -0.27
CD40P25942 AP005019.2-201ENST00000615104 511 ntBASIC13.37□□□□□ -0.27
CD40P25942 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CD40P25942 MIR6775-201ENST00000617557 69 ntBASIC13.37□□□□□ -0.27
CD40P25942 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CD40P25942 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40P25942 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.37□□□□□ -0.27
CD40P25942 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CD40P25942 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40P25942 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.36□□□□□ -0.27
CD40P25942 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CD40P25942 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
CD40P25942 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.36□□□□□ -0.27
CD40P25942 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40P25942 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CD40P25942 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CD40P25942 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40P25942 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40P25942 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms