Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX1P22670 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX1P22670 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 SPDYE19P-201ENST00000338590 713 ntBASIC16.95■□□□□ 0.3
RFX1P22670 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
RFX1P22670 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX1P22670 AL080243.2-201ENST00000418783 582 ntBASIC16.95■□□□□ 0.3
RFX1P22670 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
RFX1P22670 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX1P22670 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX1P22670 RN7SL618P-201ENST00000477850 296 ntBASIC16.95■□□□□ 0.3
RFX1P22670 AC092658.1-201ENST00000505836 891 ntBASIC16.95■□□□□ 0.3
RFX1P22670 AC093004.1-201ENST00000508850 424 ntBASIC16.95■□□□□ 0.3
RFX1P22670 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX1P22670 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.95■□□□□ 0.3
RFX1P22670 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX1P22670 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFX1P22670 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX1P22670 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX1P22670 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RFX1P22670 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX1P22670 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX1P22670 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RFX1P22670 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFX1P22670 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFX1P22670 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX1P22670 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 AC112492.5-201ENST00000421897 457 ntBASIC16.94■□□□□ 0.3
RFX1P22670 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.94■□□□□ 0.3
RFX1P22670 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.94■□□□□ 0.3
RFX1P22670 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.94■□□□□ 0.3
RFX1P22670 DOC2GP-202ENST00000514950 1163 ntBASIC16.94■□□□□ 0.3
RFX1P22670 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.94■□□□□ 0.3
RFX1P22670 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFX1P22670 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.94■□□□□ 0.3
RFX1P22670 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX1P22670 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX1P22670 AL589935.2-201ENST00000616471 1231 ntBASIC16.94■□□□□ 0.3
RFX1P22670 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RFX1P22670 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RFX1P22670 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RFX1P22670 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFX1P22670 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX1P22670 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RFX1P22670 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX1P22670 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 AL596257.1-201ENST00000641463 2694 ntBASIC16.93■□□□□ 0.3
RFX1P22670 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RFX1P22670 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RFX1P22670 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RFX1P22670 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.93■□□□□ 0.3
RFX1P22670 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RFX1P22670 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.93■□□□□ 0.3
RFX1P22670 RPL37AP1-201ENST00000412502 279 ntBASIC16.93■□□□□ 0.3
RFX1P22670 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.93■□□□□ 0.3
RFX1P22670 TARDBPP1-201ENST00000442013 1203 ntBASIC16.93■□□□□ 0.3
RFX1P22670 TTTY23B-201ENST00000442790 549 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms