Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.94■□□□□ 0.3
VTNP04004 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 ACTBP8-201ENST00000403258 1108 ntBASIC16.94■□□□□ 0.3
VTNP04004 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 YBX1P6-201ENST00000442962 1002 ntBASIC16.94■□□□□ 0.3
VTNP04004 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.94■□□□□ 0.3
VTNP04004 AC004066.1-201ENST00000502488 802 ntBASIC16.94■□□□□ 0.3
VTNP04004 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.94■□□□□ 0.3
VTNP04004 AC079316.1-201ENST00000548397 411 ntBASIC16.94■□□□□ 0.3
VTNP04004 RN7SL219P-201ENST00000582872 296 ntBASIC16.94■□□□□ 0.3
VTNP04004 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 AC010328.2-201ENST00000597698 1111 ntBASIC16.94■□□□□ 0.3
VTNP04004 AC138951.2-201ENST00000623455 1161 ntBASIC16.94■□□□□ 0.3
VTNP04004 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VTNP04004 AL158070.2-201ENST00000623713 1621 ntBASIC16.94■□□□□ 0.3
VTNP04004 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
VTNP04004 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
VTNP04004 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
VTNP04004 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
VTNP04004 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
VTNP04004 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.94■□□□□ 0.3
VTNP04004 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
VTNP04004 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.93■□□□□ 0.3
VTNP04004 AL365203.3-201ENST00000609742 2057 ntBASIC16.93■□□□□ 0.3
VTNP04004 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.93■□□□□ 0.3
VTNP04004 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
VTNP04004 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VTNP04004 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VTNP04004 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VTNP04004 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.93■□□□□ 0.3
VTNP04004 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.93■□□□□ 0.3
VTNP04004 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
VTNP04004 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.93■□□□□ 0.3
VTNP04004 BRWD1P1-201ENST00000401091 371 ntBASIC16.93■□□□□ 0.3
VTNP04004 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.93■□□□□ 0.3
VTNP04004 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.93■□□□□ 0.3
VTNP04004 AC114812.1-204ENST00000449669 728 ntBASIC16.93■□□□□ 0.3
VTNP04004 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.93■□□□□ 0.3
VTNP04004 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.93■□□□□ 0.3
VTNP04004 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.93■□□□□ 0.3
VTNP04004 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.93■□□□□ 0.3
VTNP04004 AC008894.3-201ENST00000624324 3103 ntBASIC16.93■□□□□ 0.3
VTNP04004 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.93■□□□□ 0.3
VTNP04004 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.93■□□□□ 0.3
VTNP04004 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 TUBB1P2-201ENST00000422712 1306 ntBASIC16.93■□□□□ 0.3
VTNP04004 TUBB1P1-201ENST00000503144 1300 ntBASIC16.93■□□□□ 0.3
VTNP04004 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTNP04004 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VTNP04004 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.92■□□□□ 0.3
VTNP04004 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 AC105250.1-201ENST00000509378 2057 ntBASIC16.92■□□□□ 0.3
VTNP04004 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VTNP04004 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.92■□□□□ 0.3
VTNP04004 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTNP04004 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VTNP04004 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms