Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A2O43868 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC28A2O43868 AC073347.1-201ENST00000421633 2643 ntBASIC15.07■□□□□ 0
SLC28A2O43868 AC104640.1-201ENST00000562617 2109 ntBASIC15.07■□□□□ 0
SLC28A2O43868 DBET-201ENST00000630918 3363 ntBASIC15.07■□□□□ 0
SLC28A2O43868 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A2O43868 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC28A2O43868 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC28A2O43868 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.06■□□□□ 0
SLC28A2O43868 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.06■□□□□ 0
SLC28A2O43868 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.06■□□□□ 0
SLC28A2O43868 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.06■□□□□ 0
SLC28A2O43868 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.06■□□□□ 0
SLC28A2O43868 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.06■□□□□ 0
SLC28A2O43868 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC28A2O43868 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.06■□□□□ 0
SLC28A2O43868 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.06■□□□□ 0
SLC28A2O43868 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.06■□□□□ 0
SLC28A2O43868 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.06■□□□□ 0
SLC28A2O43868 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.06■□□□□ 0
SLC28A2O43868 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.06■□□□□ 0
SLC28A2O43868 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.06■□□□□ 0
SLC28A2O43868 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 AC126177.1-201ENST00000547829 2218 ntBASIC15.06■□□□□ 0
SLC28A2O43868 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC28A2O43868 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.06■□□□□ 0
SLC28A2O43868 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.06■□□□□ 0
SLC28A2O43868 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ 0
SLC28A2O43868 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
SLC28A2O43868 AP002414.2-201ENST00000591780 3365 ntBASIC15.05■□□□□ 0
SLC28A2O43868 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC28A2O43868 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC28A2O43868 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SLC28A2O43868 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC28A2O43868 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.05■□□□□ 0
SLC28A2O43868 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC28A2O43868 AC144831.1-201ENST00000573312 2656 ntBASIC15.05■□□□□ 0
SLC28A2O43868 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC28A2O43868 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC28A2O43868 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ 0
SLC28A2O43868 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.05■□□□□ 0
SLC28A2O43868 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SLC28A2O43868 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.05■□□□□ -0
SLC28A2O43868 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.05■□□□□ -0
SLC28A2O43868 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SLC28A2O43868 HLA-H-201ENST00000383620 1096 ntBASIC15.05■□□□□ -0
SLC28A2O43868 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.05■□□□□ -0
SLC28A2O43868 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.05■□□□□ -0
SLC28A2O43868 KRT43P-201ENST00000434019 910 ntBASIC15.05■□□□□ -0
SLC28A2O43868 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.05■□□□□ -0
SLC28A2O43868 RN7SL618P-201ENST00000477850 296 ntBASIC15.05■□□□□ -0
SLC28A2O43868 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.05■□□□□ -0
SLC28A2O43868 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.05■□□□□ -0
SLC28A2O43868 RN7SL828P-201ENST00000607615 303 ntBASIC15.05■□□□□ -0
SLC28A2O43868 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
SLC28A2O43868 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SLC28A2O43868 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
SLC28A2O43868 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.05■□□□□ -0
SLC28A2O43868 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SLC28A2O43868 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SLC28A2O43868 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.05■□□□□ -0
SLC28A2O43868 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms