Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHMP2AO43633 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHMP2AO43633 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP2AO43633 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHMP2AO43633 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHMP2AO43633 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP2AO43633 SOCS2P1-201ENST00000417727 557 ntBASIC17.47■□□□□ 0.39
CHMP2AO43633 TMEM14DP-201ENST00000422205 345 ntBASIC17.47■□□□□ 0.39
CHMP2AO43633 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP2AO43633 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.47■□□□□ 0.39
CHMP2AO43633 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.47■□□□□ 0.39
CHMP2AO43633 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHMP2AO43633 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP2AO43633 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP2AO43633 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP2AO43633 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP2AO43633 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHMP2AO43633 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP2AO43633 DRD5P1-201ENST00000456605 1438 ntBASIC17.47■□□□□ 0.39
CHMP2AO43633 KRT8P22-201ENST00000562317 1415 ntBASIC17.47■□□□□ 0.39
CHMP2AO43633 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP2AO43633 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP2AO43633 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP2AO43633 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP2AO43633 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 AC136621.1-201ENST00000624017 2304 ntBASIC17.46■□□□□ 0.39
CHMP2AO43633 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMP2AO43633 TTTY23B-201ENST00000442790 549 ntBASIC17.46■□□□□ 0.39
CHMP2AO43633 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP2AO43633 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMP2AO43633 GIMAP3P-201ENST00000495150 836 ntBASIC17.46■□□□□ 0.39
CHMP2AO43633 CR383656.12-201ENST00000549567 513 ntBASIC17.46■□□□□ 0.39
CHMP2AO43633 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMP2AO43633 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP2AO43633 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMP2AO43633 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP2AO43633 AC010319.3-201ENST00000597028 470 ntBASIC17.46■□□□□ 0.39
CHMP2AO43633 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMP2AO43633 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP2AO43633 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHMP2AO43633 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
CHMP2AO43633 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP2AO43633 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP2AO43633 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP2AO43633 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.46■□□□□ 0.38
CHMP2AO43633 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHMP2AO43633 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.46■□□□□ 0.38
CHMP2AO43633 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP2AO43633 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP2AO43633 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP2AO43633 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP2AO43633 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHMP2AO43633 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP2AO43633 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.45■□□□□ 0.38
CHMP2AO43633 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP2AO43633 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CHMP2AO43633 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP2AO43633 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP2AO43633 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP2AO43633 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.45■□□□□ 0.38
CHMP2AO43633 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.45■□□□□ 0.38
CHMP2AO43633 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.45■□□□□ 0.38
CHMP2AO43633 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.45■□□□□ 0.38
CHMP2AO43633 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms