Protein–RNA interactions for Protein: A2A2Y4

FRMD3, FERM domain-containing protein 3, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3A2A2Y4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FRMD3A2A2Y4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FRMD3A2A2Y4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FRMD3A2A2Y4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FRMD3A2A2Y4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FRMD3A2A2Y4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FRMD3A2A2Y4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
FRMD3A2A2Y4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FRMD3A2A2Y4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.23■□□□□ 0.35
FRMD3A2A2Y4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 AC023024.2-201ENST00000623561 1993 ntBASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 GHSR-202ENST00000427970 912 ntBASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 AC148477.4-201ENST00000613430 1793 ntBASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
FRMD3A2A2Y4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 MROH4P-201ENST00000431302 1578 ntBASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 SPTLC1P1-201ENST00000447199 261 ntBASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 GAPDHP40-201ENST00000505218 1006 ntBASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 DOC2GP-202ENST00000514950 1163 ntBASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 RARRES2P5-201ENST00000564013 466 ntBASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 AJ011932.1-201ENST00000621707 465 ntBASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FRMD3A2A2Y4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms