Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 AC027369.6-201ENST00000525520 931 ntBASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 ZNF890P-202ENST00000530367 1156 ntBASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 AL161772.1-201ENST00000610494 4412 ntBASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 AC084364.1-201ENST00000551967 1556 ntBASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 SDR42E1P3-201ENST00000438345 502 ntBASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 AL117351.1-201ENST00000438864 766 ntBASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 AC068313.1-201ENST00000604028 1008 ntBASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 AC087499.5-201ENST00000452760 1342 ntBASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.56■□□□□ 0.08
VPS9D1Q9Y2B5 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS9D1Q9Y2B5 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS9D1Q9Y2B5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms