Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 GOLGA2P4-201ENST00000441462 777 ntBASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 AC055811.4-201ENST00000624039 1754 ntBASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 AC015818.8-201ENST00000587907 1519 ntBASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 FTLP10-202ENST00000505798 471 ntBASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 RN7SL713P-201ENST00000582127 302 ntBASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 ZACNP1-201ENST00000612259 710 ntBASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPO2Q9UMS6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 HOMER2P2-201ENST00000451621 847 ntBASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 AC106820.3-201ENST00000561653 397 ntBASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 MIR4538-201ENST00000581377 78 ntBASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 RN7SL219P-201ENST00000582872 296 ntBASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 AC138466.3-201ENST00000619983 221 ntBASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 TMBIM7P-203ENST00000641617 1718 ntBASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPO2Q9UMS6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms