Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 POLD2P1-201ENST00000511220 997 ntBASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 PKD1P5-201ENST00000532415 10291 ntBASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC44A1Q8WWI5 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 C20orf181-201ENST00000623918 480 ntBASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms