Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 AC190387.1-201ENST00000551683 408 ntBASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 SRD5A3P1-201ENST00000603021 949 ntBASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 AC007541.1-201ENST00000570282 1469 ntBASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 AC015910.1-201ENST00000579400 975 ntBASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 AL132655.2-201ENST00000596276 594 ntBASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 AC004790.1-201ENST00000612686 536 ntBASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 LINC00528-201ENST00000600723 2160 ntBASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMARCC2Q8TAQ2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMARCC2Q8TAQ2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMARCC2Q8TAQ2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMARCC2Q8TAQ2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMARCC2Q8TAQ2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 CICP24-201ENST00000605464 2705 ntBASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 TIMM17BP1-201ENST00000545713 516 ntBASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms