Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 RNA5SP412-201ENST00000516234 123 ntBASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 AC025279.2-201ENST00000569730 653 ntBASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 MIR4538-201ENST00000581377 78 ntBASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 AC145423.3-201ENST00000615987 467 ntBASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 BX539320.1-201ENST00000623759 877 ntBASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 PCDHA1-201ENST00000378133 2726 ntBASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC38A9Q8NBW4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 AL138709.1-201ENST00000614840 1693 ntBASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 PKD1P5-201ENST00000532415 10291 ntBASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 AC084364.1-201ENST00000551967 1556 ntBASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC38A9Q8NBW4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 C2orf27AP3-201ENST00000434123 579 ntBASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 ACTBP11-201ENST00000436287 1126 ntBASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC38A9Q8NBW4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms