Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 HCG4-201ENST00000418983 998 ntBASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 AC005412.3-201ENST00000580309 715 ntBASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 MIR3180-1-201ENST00000580374 94 ntBASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 MIR3180-3-201ENST00000584616 94 ntBASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 AC004706.3-202ENST00000621574 984 ntBASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 AC116407.4-201ENST00000623319 1061 ntBASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 AC067750.1-201ENST00000608826 6545 ntBASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 AC023090.2-201ENST00000625182 2110 ntBASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 AC106795.1-205ENST00000512851 1056 ntBASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 AC139887.3-201ENST00000568585 713 ntBASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 AC099336.1-202ENST00000602961 463 ntBASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD2Q8IV50 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 AC015818.8-201ENST00000587907 1519 ntBASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 NUS1P2-201ENST00000417358 873 ntBASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 AP000867.3-201ENST00000524675 377 ntBASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 AC012615.1-201ENST00000565797 1299 ntBASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms