Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 AC027307.2-201ENST00000591252 911 ntBASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 AC020658.6-201ENST00000623564 1870 ntBASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRFAM7AQ494W8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 MRPS18AP1-201ENST00000414458 589 ntBASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 AP000842.3-202ENST00000569238 1080 ntBASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms