Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RPL5P21-201ENST00000404620 815 ntBASIC14.55□□□□□ -0.08
RFX4Q33E94 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
RFX4Q33E94 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.55□□□□□ -0.08
RFX4Q33E94 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.55□□□□□ -0.08
RFX4Q33E94 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.55□□□□□ -0.08
RFX4Q33E94 KRT19P2-202ENST00000557173 1012 ntBASIC14.55□□□□□ -0.08
RFX4Q33E94 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.55□□□□□ -0.08
RFX4Q33E94 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.55□□□□□ -0.08
RFX4Q33E94 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.55□□□□□ -0.08
RFX4Q33E94 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.55□□□□□ -0.08
RFX4Q33E94 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.55□□□□□ -0.08
RFX4Q33E94 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFX4Q33E94 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFX4Q33E94 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFX4Q33E94 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFX4Q33E94 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RFX4Q33E94 AL691432.1-201ENST00000596308 1422 ntBASIC14.55□□□□□ -0.08
RFX4Q33E94 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.55□□□□□ -0.08
RFX4Q33E94 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.55□□□□□ -0.08
RFX4Q33E94 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.55□□□□□ -0.08
RFX4Q33E94 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFX4Q33E94 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFX4Q33E94 AC041040.2-201ENST00000622926 2899 ntBASIC14.55□□□□□ -0.08
RFX4Q33E94 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFX4Q33E94 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFX4Q33E94 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RFX4Q33E94 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.55□□□□□ -0.08
RFX4Q33E94 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFX4Q33E94 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RFX4Q33E94 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.54□□□□□ -0.08
RFX4Q33E94 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RFX4Q33E94 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
RFX4Q33E94 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.54□□□□□ -0.08
RFX4Q33E94 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RFX4Q33E94 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.54□□□□□ -0.08
RFX4Q33E94 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.54□□□□□ -0.08
RFX4Q33E94 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.54□□□□□ -0.08
RFX4Q33E94 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.54□□□□□ -0.08
RFX4Q33E94 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RFX4Q33E94 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.54□□□□□ -0.08
RFX4Q33E94 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.54□□□□□ -0.08
RFX4Q33E94 SLC25A6P4-201ENST00000586535 553 ntBASIC14.54□□□□□ -0.08
RFX4Q33E94 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 AC064836.3-201ENST00000607928 673 ntBASIC14.54□□□□□ -0.08
RFX4Q33E94 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.54□□□□□ -0.08
RFX4Q33E94 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.54□□□□□ -0.08
RFX4Q33E94 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 BX640514.1-201ENST00000583223 1918 ntBASIC14.54□□□□□ -0.08
RFX4Q33E94 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.54□□□□□ -0.08
RFX4Q33E94 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.54□□□□□ -0.08
RFX4Q33E94 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.54□□□□□ -0.08
RFX4Q33E94 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.54□□□□□ -0.08
RFX4Q33E94 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RFX4Q33E94 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
RFX4Q33E94 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFX4Q33E94 AC087386.2-201ENST00000623212 4637 ntBASIC14.54□□□□□ -0.08
RFX4Q33E94 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.53□□□□□ -0.08
RFX4Q33E94 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFX4Q33E94 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFX4Q33E94 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFX4Q33E94 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFX4Q33E94 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
RFX4Q33E94 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFX4Q33E94 AC006504.5-208ENST00000588784 2401 ntBASIC14.53□□□□□ -0.08
RFX4Q33E94 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFX4Q33E94 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.53□□□□□ -0.08
RFX4Q33E94 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.53□□□□□ -0.08
RFX4Q33E94 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFX4Q33E94 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFX4Q33E94 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFX4Q33E94 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
RFX4Q33E94 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFX4Q33E94 BNIP3P1-202ENST00000550043 1585 ntBASIC14.53□□□□□ -0.08
RFX4Q33E94 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.53□□□□□ -0.08
RFX4Q33E94 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms