Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PCDH1Q08174 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.04■□□□□ -0
PCDH1Q08174 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.04■□□□□ -0
PCDH1Q08174 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
PCDH1Q08174 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.04■□□□□ -0
PCDH1Q08174 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.04■□□□□ -0
PCDH1Q08174 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.04■□□□□ -0
PCDH1Q08174 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.04■□□□□ -0
PCDH1Q08174 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.04■□□□□ -0
PCDH1Q08174 AC241585.1-201ENST00000433527 519 ntBASIC15.04■□□□□ -0
PCDH1Q08174 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.04■□□□□ -0
PCDH1Q08174 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.04■□□□□ -0
PCDH1Q08174 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.04■□□□□ -0
PCDH1Q08174 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.04■□□□□ -0
PCDH1Q08174 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
PCDH1Q08174 AL109936.8-201ENST00000641772 604 ntBASIC15.04■□□□□ -0
PCDH1Q08174 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.04■□□□□ -0
PCDH1Q08174 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.04■□□□□ -0
PCDH1Q08174 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PCDH1Q08174 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PCDH1Q08174 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.04■□□□□ -0
PCDH1Q08174 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
PCDH1Q08174 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.04■□□□□ -0
PCDH1Q08174 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PCDH1Q08174 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDH1Q08174 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.03■□□□□ -0
PCDH1Q08174 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCDH1Q08174 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.03■□□□□ -0
PCDH1Q08174 AC148477.4-201ENST00000613430 1793 ntBASIC15.03■□□□□ -0
PCDH1Q08174 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.03■□□□□ -0
PCDH1Q08174 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.03■□□□□ -0
PCDH1Q08174 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.03■□□□□ -0
PCDH1Q08174 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCDH1Q08174 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.03■□□□□ -0
PCDH1Q08174 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.03■□□□□ -0
PCDH1Q08174 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.03■□□□□ -0
PCDH1Q08174 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCDH1Q08174 TREML5P-201ENST00000421694 576 ntBASIC15.03■□□□□ -0
PCDH1Q08174 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.03■□□□□ -0
PCDH1Q08174 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 AC044860.1-202ENST00000559481 777 ntBASIC15.03■□□□□ -0
PCDH1Q08174 AC009407.1-201ENST00000568958 598 ntBASIC15.03■□□□□ -0
PCDH1Q08174 AL391069.4-201ENST00000609583 481 ntBASIC15.03■□□□□ -0
PCDH1Q08174 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.03■□□□□ -0
PCDH1Q08174 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.03■□□□□ -0
PCDH1Q08174 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PCDH1Q08174 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PCDH1Q08174 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PCDH1Q08174 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCDH1Q08174 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH1Q08174 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.03■□□□□ -0
PCDH1Q08174 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
PCDH1Q08174 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PCDH1Q08174 AL121723.1-201ENST00000445194 1519 ntBASIC15.02■□□□□ -0
PCDH1Q08174 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.02■□□□□ -0
PCDH1Q08174 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms