Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.13■□□□□ 0.33
PMS1P54277 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PMS1P54277 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.13■□□□□ 0.33
PMS1P54277 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.13■□□□□ 0.33
PMS1P54277 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PMS1P54277 RN7SL618P-201ENST00000477850 296 ntBASIC17.13■□□□□ 0.33
PMS1P54277 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.13■□□□□ 0.33
PMS1P54277 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.13■□□□□ 0.33
PMS1P54277 AC027369.6-201ENST00000525520 931 ntBASIC17.13■□□□□ 0.33
PMS1P54277 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PMS1P54277 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.13■□□□□ 0.33
PMS1P54277 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 LINC00552-201ENST00000625151 2579 ntBASIC17.13■□□□□ 0.33
PMS1P54277 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.13■□□□□ 0.33
PMS1P54277 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.13■□□□□ 0.33
PMS1P54277 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PMS1P54277 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PMS1P54277 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PMS1P54277 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PMS1P54277 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 AL121723.1-201ENST00000445194 1519 ntBASIC17.12■□□□□ 0.33
PMS1P54277 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.12■□□□□ 0.33
PMS1P54277 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PMS1P54277 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PMS1P54277 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PMS1P54277 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.12■□□□□ 0.33
PMS1P54277 TREML5P-201ENST00000421694 576 ntBASIC17.12■□□□□ 0.33
PMS1P54277 AC107890.1-201ENST00000422478 521 ntBASIC17.12■□□□□ 0.33
PMS1P54277 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.12■□□□□ 0.33
PMS1P54277 AC097493.3-201ENST00000509725 367 ntBASIC17.12■□□□□ 0.33
PMS1P54277 AC069120.2-201ENST00000524091 540 ntBASIC17.12■□□□□ 0.33
PMS1P54277 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.12■□□□□ 0.33
PMS1P54277 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.12■□□□□ 0.33
PMS1P54277 AC140878.1-201ENST00000565277 250 ntBASIC17.12■□□□□ 0.33
PMS1P54277 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.12■□□□□ 0.33
PMS1P54277 AC074044.1-201ENST00000609673 707 ntBASIC17.12■□□□□ 0.33
PMS1P54277 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PMS1P54277 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.12■□□□□ 0.33
PMS1P54277 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.12■□□□□ 0.33
PMS1P54277 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PMS1P54277 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PMS1P54277 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PMS1P54277 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.11■□□□□ 0.33
PMS1P54277 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PMS1P54277 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.11■□□□□ 0.33
PMS1P54277 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PMS1P54277 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PMS1P54277 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PMS1P54277 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.11■□□□□ 0.33
PMS1P54277 AL133267.1-201ENST00000398220 340 ntBASIC17.11■□□□□ 0.33
PMS1P54277 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.11■□□□□ 0.33
PMS1P54277 TOMM22P5-201ENST00000416399 439 ntBASIC17.11■□□□□ 0.33
PMS1P54277 GHSR-202ENST00000427970 912 ntBASIC17.11■□□□□ 0.33
PMS1P54277 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.11■□□□□ 0.33
PMS1P54277 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.11■□□□□ 0.33
PMS1P54277 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.11■□□□□ 0.33
PMS1P54277 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.11■□□□□ 0.33
PMS1P54277 AC025678.2-201ENST00000562061 970 ntBASIC17.11■□□□□ 0.33
PMS1P54277 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.11■□□□□ 0.33
PMS1P54277 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.11■□□□□ 0.33
PMS1P54277 AC025181.2-201ENST00000606994 802 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms