Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 TIAM2-206ENST00000456877 3275 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 AC018645.3-201ENST00000628855 2646 ntBASIC10.32□□□□□ -0.76
PCP4P48539 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 POC5-213ENST00000514838 1984 ntTSL 5 BASIC10.32□□□□□ -0.76
PCP4P48539 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.32□□□□□ -0.76
PCP4P48539 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
PCP4P48539 UBIAD1-202ENST00000376810 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
PCP4P48539 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC10.32□□□□□ -0.76
PCP4P48539 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC10.31□□□□□ -0.76
PCP4P48539 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.31□□□□□ -0.76
PCP4P48539 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 KDM2A-201ENST00000308783 3666 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 CLDN10-203ENST00000376873 2656 ntTSL 2 BASIC10.31□□□□□ -0.76
PCP4P48539 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC10.31□□□□□ -0.76
PCP4P48539 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
PCP4P48539 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
PCP4P48539 DLST-202ENST00000334220 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.31□□□□□ -0.76
PCP4P48539 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 SLC44A2-202ENST00000407327 3301 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 ANKLE2-208ENST00000542282 3302 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 PDHA1-204ENST00000379806 3484 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC10.31□□□□□ -0.76
PCP4P48539 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC10.31□□□□□ -0.76
PCP4P48539 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC10.31□□□□□ -0.76
PCP4P48539 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
PCP4P48539 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 AC138470.1-201ENST00000624638 1897 ntBASIC10.31□□□□□ -0.76
PCP4P48539 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
PCP4P48539 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 CLSTN3-207ENST00000537408 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 SCNM1-202ENST00000368905 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 PLAT-204ENST00000429710 1655 ntTSL 2 BASIC10.31□□□□□ -0.76
PCP4P48539 AL109618.1-201ENST00000434910 1683 ntBASIC10.31□□□□□ -0.76
PCP4P48539 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
PCP4P48539 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PCP4P48539 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
PCP4P48539 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC10.31□□□□□ -0.76
PCP4P48539 PCDHA9-201ENST00000378122 6900 ntBASIC10.3□□□□□ -0.76
PCP4P48539 PTPRR-201ENST00000283228 3529 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 ABCB9-206ENST00000442028 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 MTFR1L-201ENST00000374300 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 MCCC2-201ENST00000340941 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 GIMAP6-203ENST00000618759 3910 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC10.3□□□□□ -0.76
PCP4P48539 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 ZNF200-204ENST00000414144 3306 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC10.3□□□□□ -0.76
PCP4P48539 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
PCP4P48539 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 ZWINT-204ENST00000395405 1851 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
PCP4P48539 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 ARHGEF4-201ENST00000326016 3666 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 FOSB-202ENST00000417353 3667 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC10.3□□□□□ -0.76
PCP4P48539 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC10.3□□□□□ -0.76
PCP4P48539 AC124947.2-201ENST00000547118 1133 ntBASIC10.3□□□□□ -0.76
PCP4P48539 AL356019.2-201ENST00000556738 3829 ntBASIC10.3□□□□□ -0.76
PCP4P48539 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 AC012183.1-201ENST00000625197 499 ntBASIC10.3□□□□□ -0.76
PCP4P48539 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms