Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.24■□□□□ 0.51
NEDD4P46934 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.24■□□□□ 0.51
NEDD4P46934 AC132938.2-201ENST00000579188 680 ntBASIC18.24■□□□□ 0.51
NEDD4P46934 CLUHP6-201ENST00000580789 941 ntBASIC18.24■□□□□ 0.51
NEDD4P46934 AC133539.2-201ENST00000604757 467 ntBASIC18.24■□□□□ 0.51
NEDD4P46934 AL033527.5-201ENST00000641382 801 ntBASIC18.24■□□□□ 0.51
NEDD4P46934 AL591163.1-201ENST00000641757 987 ntBASIC18.24■□□□□ 0.51
NEDD4P46934 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NEDD4P46934 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4P46934 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.24■□□□□ 0.51
NEDD4P46934 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.24■□□□□ 0.51
NEDD4P46934 AC091951.1-201ENST00000512854 2465 ntBASIC18.24■□□□□ 0.51
NEDD4P46934 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4P46934 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.24■□□□□ 0.51
NEDD4P46934 AC148477.4-201ENST00000613430 1793 ntBASIC18.24■□□□□ 0.51
NEDD4P46934 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4P46934 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4P46934 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4P46934 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4P46934 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NEDD4P46934 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
NEDD4P46934 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4P46934 AL138799.1-201ENST00000448213 1675 ntBASIC18.24■□□□□ 0.51
NEDD4P46934 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.24■□□□□ 0.51
NEDD4P46934 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NEDD4P46934 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.24■□□□□ 0.51
NEDD4P46934 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4P46934 AL359258.3-201ENST00000622910 2331 ntBASIC18.24■□□□□ 0.51
NEDD4P46934 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4P46934 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4P46934 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4P46934 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.24■□□□□ 0.51
NEDD4P46934 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NEDD4P46934 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.24■□□□□ 0.51
NEDD4P46934 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NEDD4P46934 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.23■□□□□ 0.51
NEDD4P46934 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.23■□□□□ 0.51
NEDD4P46934 NME2P1-201ENST00000426182 414 ntBASIC18.23■□□□□ 0.51
NEDD4P46934 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.23■□□□□ 0.51
NEDD4P46934 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.23■□□□□ 0.51
NEDD4P46934 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.23■□□□□ 0.51
NEDD4P46934 CU634019.7-201ENST00000624153 1185 ntBASIC18.23■□□□□ 0.51
NEDD4P46934 FP236241.2-201ENST00000624906 1185 ntBASIC18.23■□□□□ 0.51
NEDD4P46934 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.23■□□□□ 0.51
NEDD4P46934 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
NEDD4P46934 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
NEDD4P46934 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
NEDD4P46934 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.23■□□□□ 0.51
NEDD4P46934 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.23■□□□□ 0.51
NEDD4P46934 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NEDD4P46934 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.23■□□□□ 0.51
NEDD4P46934 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.23■□□□□ 0.51
NEDD4P46934 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
NEDD4P46934 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.23■□□□□ 0.51
NEDD4P46934 AC104457.1-201ENST00000401024 814 ntBASIC18.23■□□□□ 0.51
NEDD4P46934 GHSR-202ENST00000427970 912 ntBASIC18.23■□□□□ 0.51
NEDD4P46934 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.23■□□□□ 0.51
NEDD4P46934 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.23■□□□□ 0.51
NEDD4P46934 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.23■□□□□ 0.51
NEDD4P46934 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NEDD4P46934 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NEDD4P46934 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.23■□□□□ 0.51
NEDD4P46934 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4P46934 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NEDD4P46934 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.22■□□□□ 0.51
NEDD4P46934 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 AC093525.8-201ENST00000624099 1342 ntBASIC18.22■□□□□ 0.51
NEDD4P46934 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NEDD4P46934 AC126365.1-201ENST00000578585 1514 ntBASIC18.22■□□□□ 0.51
NEDD4P46934 MSTO2P-201ENST00000314835 1709 ntBASIC18.22■□□□□ 0.51
NEDD4P46934 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.22■□□□□ 0.51
NEDD4P46934 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.22■□□□□ 0.51
NEDD4P46934 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
NEDD4P46934 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NEDD4P46934 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NEDD4P46934 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms