Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCAP37840 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SNCAP37840 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCAP37840 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCAP37840 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.89□□□□□ -0.35
SNCAP37840 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCAP37840 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.89□□□□□ -0.35
SNCAP37840 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SNCAP37840 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 AC098831.1-202ENST00000438821 336 ntBASIC12.89□□□□□ -0.35
SNCAP37840 FAAHP1-202ENST00000446499 1238 ntBASIC12.89□□□□□ -0.35
SNCAP37840 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.89□□□□□ -0.35
SNCAP37840 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.89□□□□□ -0.35
SNCAP37840 UNC93B6-202ENST00000528242 690 ntBASIC12.89□□□□□ -0.35
SNCAP37840 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.89□□□□□ -0.35
SNCAP37840 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.89□□□□□ -0.35
SNCAP37840 AL009183.1-201ENST00000603760 355 ntBASIC12.89□□□□□ -0.35
SNCAP37840 AC023141.13-201ENST00000604991 943 ntBASIC12.89□□□□□ -0.35
SNCAP37840 AC148477.8-201ENST00000624298 468 ntBASIC12.89□□□□□ -0.35
SNCAP37840 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.89□□□□□ -0.35
SNCAP37840 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SNCAP37840 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.89□□□□□ -0.35
SNCAP37840 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
SNCAP37840 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.89□□□□□ -0.35
SNCAP37840 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCAP37840 PEG13-201ENST00000631594 5667 ntBASIC12.89□□□□□ -0.35
SNCAP37840 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.89□□□□□ -0.35
SNCAP37840 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCAP37840 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCAP37840 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SNCAP37840 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.88□□□□□ -0.35
SNCAP37840 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
SNCAP37840 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 AC011477.6-201ENST00000604980 1927 ntBASIC12.88□□□□□ -0.35
SNCAP37840 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.88□□□□□ -0.35
SNCAP37840 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SNCAP37840 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 AL031284.1-201ENST00000419297 478 ntBASIC12.88□□□□□ -0.35
SNCAP37840 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.88□□□□□ -0.35
SNCAP37840 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.88□□□□□ -0.35
SNCAP37840 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.88□□□□□ -0.35
SNCAP37840 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.88□□□□□ -0.35
SNCAP37840 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.88□□□□□ -0.35
SNCAP37840 AC096734.2-201ENST00000562054 433 ntBASIC12.88□□□□□ -0.35
SNCAP37840 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.88□□□□□ -0.35
SNCAP37840 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.88□□□□□ -0.35
SNCAP37840 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.88□□□□□ -0.35
SNCAP37840 AL078644.1-201ENST00000609881 752 ntBASIC12.88□□□□□ -0.35
SNCAP37840 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SNCAP37840 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms