Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
CKS2P33552 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS2P33552 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS2P33552 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS2P33552 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS2P33552 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS2P33552 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
CKS2P33552 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CKS2P33552 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS2P33552 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS2P33552 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.52□□□□□ -0.56
CKS2P33552 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.52□□□□□ -0.56
CKS2P33552 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS2P33552 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS2P33552 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
CKS2P33552 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CKS2P33552 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS2P33552 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS2P33552 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
CKS2P33552 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
CKS2P33552 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.52□□□□□ -0.57
CKS2P33552 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.52□□□□□ -0.57
CKS2P33552 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
CKS2P33552 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS2P33552 PMS2P4-201ENST00000412466 1052 ntBASIC11.52□□□□□ -0.57
CKS2P33552 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CKS2P33552 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.52□□□□□ -0.57
CKS2P33552 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.52□□□□□ -0.57
CKS2P33552 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.52□□□□□ -0.57
CKS2P33552 AP000867.3-201ENST00000524675 377 ntBASIC11.52□□□□□ -0.57
CKS2P33552 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS2P33552 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.52□□□□□ -0.57
CKS2P33552 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.52□□□□□ -0.57
CKS2P33552 AL031055.1-201ENST00000606362 631 ntBASIC11.52□□□□□ -0.57
CKS2P33552 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
CKS2P33552 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
CKS2P33552 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS2P33552 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS2P33552 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
CKS2P33552 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.52□□□□□ -0.57
CKS2P33552 BX640514.1-201ENST00000583223 1918 ntBASIC11.52□□□□□ -0.57
CKS2P33552 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS2P33552 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS2P33552 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.52□□□□□ -0.57
CKS2P33552 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CKS2P33552 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CKS2P33552 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.52□□□□□ -0.57
CKS2P33552 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
CKS2P33552 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.52□□□□□ -0.57
CKS2P33552 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CKS2P33552 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
CKS2P33552 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.51□□□□□ -0.57
CKS2P33552 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 AC027601.5-201ENST00000624065 2482 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms