Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.7■□□□□ 0.42
CNGA1P29973 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNGA1P29973 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.7■□□□□ 0.42
CNGA1P29973 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNGA1P29973 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.7■□□□□ 0.42
CNGA1P29973 MIR4741-201ENST00000579822 90 ntBASIC17.7■□□□□ 0.42
CNGA1P29973 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.7■□□□□ 0.42
CNGA1P29973 AL021578.1-201ENST00000613646 709 ntBASIC17.7■□□□□ 0.42
CNGA1P29973 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.7■□□□□ 0.42
CNGA1P29973 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNGA1P29973 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNGA1P29973 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNGA1P29973 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CNGA1P29973 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNGA1P29973 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNGA1P29973 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNGA1P29973 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.7■□□□□ 0.42
CNGA1P29973 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNGA1P29973 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CNGA1P29973 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNGA1P29973 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CNGA1P29973 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.69■□□□□ 0.42
CNGA1P29973 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CNGA1P29973 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CNGA1P29973 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CNGA1P29973 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 ELK2AP-201ENST00000392510 1007 ntBASIC17.69■□□□□ 0.42
CNGA1P29973 BTBD6P1-201ENST00000412176 1267 ntBASIC17.69■□□□□ 0.42
CNGA1P29973 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.69■□□□□ 0.42
CNGA1P29973 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.69■□□□□ 0.42
CNGA1P29973 KRT18P43-201ENST00000469825 1281 ntBASIC17.69■□□□□ 0.42
CNGA1P29973 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.69■□□□□ 0.42
CNGA1P29973 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.69■□□□□ 0.42
CNGA1P29973 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.69■□□□□ 0.42
CNGA1P29973 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.69■□□□□ 0.42
CNGA1P29973 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.69■□□□□ 0.42
CNGA1P29973 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNGA1P29973 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.69■□□□□ 0.42
CNGA1P29973 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CNGA1P29973 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CNGA1P29973 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNGA1P29973 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.68■□□□□ 0.42
CNGA1P29973 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.68■□□□□ 0.42
CNGA1P29973 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.68■□□□□ 0.42
CNGA1P29973 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.68■□□□□ 0.42
CNGA1P29973 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 AL513523.2-202ENST00000427283 2040 ntBASIC17.68■□□□□ 0.42
CNGA1P29973 CALR4P-201ENST00000431943 946 ntBASIC17.68■□□□□ 0.42
CNGA1P29973 FAM197Y7-201ENST00000432892 766 ntBASIC17.68■□□□□ 0.42
CNGA1P29973 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.68■□□□□ 0.42
CNGA1P29973 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.68■□□□□ 0.42
CNGA1P29973 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.68■□□□□ 0.42
CNGA1P29973 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.68■□□□□ 0.42
CNGA1P29973 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CNGA1P29973 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.68■□□□□ 0.42
CNGA1P29973 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.68■□□□□ 0.42
CNGA1P29973 AC025279.2-201ENST00000569730 653 ntBASIC17.68■□□□□ 0.42
CNGA1P29973 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CNGA1P29973 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CNGA1P29973 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.68■□□□□ 0.42
CNGA1P29973 AC026691.1-201ENST00000602502 2017 ntBASIC17.68■□□□□ 0.42
CNGA1P29973 AC093813.1-201ENST00000605066 256 ntBASIC17.68■□□□□ 0.42
CNGA1P29973 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.68■□□□□ 0.42
CNGA1P29973 AC138951.2-201ENST00000623455 1161 ntBASIC17.68■□□□□ 0.42
CNGA1P29973 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNGA1P29973 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms