Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VAPBO95292 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.69■□□□□ 0.1
VAPBO95292 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 AC125807.1-201ENST00000483097 614 ntBASIC15.69■□□□□ 0.1
VAPBO95292 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.69■□□□□ 0.1
VAPBO95292 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.69■□□□□ 0.1
VAPBO95292 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.69■□□□□ 0.1
VAPBO95292 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.69■□□□□ 0.1
VAPBO95292 AC025048.3-201ENST00000590609 569 ntBASIC15.69■□□□□ 0.1
VAPBO95292 AL138828.2-201ENST00000615812 383 ntBASIC15.69■□□□□ 0.1
VAPBO95292 AC005702.4-201ENST00000618393 416 ntBASIC15.69■□□□□ 0.1
VAPBO95292 AC023511.2-201ENST00000618803 211 ntBASIC15.69■□□□□ 0.1
VAPBO95292 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.69■□□□□ 0.1
VAPBO95292 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 AC084364.1-201ENST00000551967 1556 ntBASIC15.69■□□□□ 0.1
VAPBO95292 AL009178.2-201ENST00000597278 2719 ntBASIC15.69■□□□□ 0.1
VAPBO95292 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 PCDHA3-202ENST00000532566 4594 ntBASIC15.69■□□□□ 0.1
VAPBO95292 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VAPBO95292 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.69■□□□□ 0.1
VAPBO95292 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.68■□□□□ 0.1
VAPBO95292 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.68■□□□□ 0.1
VAPBO95292 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VAPBO95292 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VAPBO95292 Z97205.2-201ENST00000564697 1639 ntBASIC15.68■□□□□ 0.1
VAPBO95292 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.68■□□□□ 0.1
VAPBO95292 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
VAPBO95292 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 AGAP7P-201ENST00000582299 2062 ntBASIC15.68■□□□□ 0.1
VAPBO95292 AGAP14-201ENST00000624701 2060 ntBASIC15.68■□□□□ 0.1
VAPBO95292 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VAPBO95292 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.68■□□□□ 0.1
VAPBO95292 KRT18P64-201ENST00000434946 1219 ntBASIC15.68■□□□□ 0.1
VAPBO95292 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.68■□□□□ 0.1
VAPBO95292 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.68■□□□□ 0.1
VAPBO95292 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
VAPBO95292 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.68■□□□□ 0.1
VAPBO95292 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.68■□□□□ 0.1
VAPBO95292 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.68■□□□□ 0.1
VAPBO95292 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 TEX28P1-201ENST00000613479 1221 ntBASIC15.68■□□□□ 0.1
VAPBO95292 TEX28P2-201ENST00000617764 1221 ntBASIC15.68■□□□□ 0.1
VAPBO95292 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.68■□□□□ 0.1
VAPBO95292 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.68■□□□□ 0.1
VAPBO95292 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.68■□□□□ 0.1
VAPBO95292 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VAPBO95292 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.68■□□□□ 0.1
VAPBO95292 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.68■□□□□ 0.1
VAPBO95292 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VAPBO95292 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPBO95292 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.68■□□□□ 0.1
VAPBO95292 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPBO95292 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms