Protein–RNA interactions for Protein: O76064

RNF8, E3 ubiquitin-protein ligase RNF8, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8O76064 TEX28P1-201ENST00000613479 1221 ntBASIC16.45■□□□□ 0.22
RNF8O76064 TEX28P2-201ENST00000617764 1221 ntBASIC16.45■□□□□ 0.22
RNF8O76064 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF8O76064 AC093028.1-201ENST00000622998 982 ntBASIC16.45■□□□□ 0.22
RNF8O76064 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF8O76064 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF8O76064 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RNF8O76064 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF8O76064 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF8O76064 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF8O76064 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF8O76064 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF8O76064 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF8O76064 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF8O76064 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF8O76064 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF8O76064 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF8O76064 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF8O76064 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF8O76064 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF8O76064 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF8O76064 AP002414.2-201ENST00000591780 3365 ntBASIC16.44■□□□□ 0.22
RNF8O76064 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF8O76064 AC112693.3-201ENST00000624819 1983 ntBASIC16.44■□□□□ 0.22
RNF8O76064 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF8O76064 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF8O76064 RN7SL618P-201ENST00000477850 296 ntBASIC16.44■□□□□ 0.22
RNF8O76064 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF8O76064 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF8O76064 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF8O76064 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF8O76064 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF8O76064 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.44■□□□□ 0.22
RNF8O76064 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF8O76064 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF8O76064 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 Z97205.2-201ENST00000564697 1639 ntBASIC16.44■□□□□ 0.22
RNF8O76064 AC006486.2-201ENST00000624246 2199 ntBASIC16.44■□□□□ 0.22
RNF8O76064 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF8O76064 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF8O76064 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF8O76064 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF8O76064 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF8O76064 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF8O76064 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RNF8O76064 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF8O76064 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RNF8O76064 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF8O76064 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RNF8O76064 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RNF8O76064 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF8O76064 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF8O76064 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF8O76064 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF8O76064 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF8O76064 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF8O76064 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF8O76064 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF8O76064 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF8O76064 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.43■□□□□ 0.22
RNF8O76064 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF8O76064 AC025048.3-201ENST00000590609 569 ntBASIC16.43■□□□□ 0.22
RNF8O76064 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF8O76064 AC005702.4-201ENST00000618393 416 ntBASIC16.43■□□□□ 0.22
RNF8O76064 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF8O76064 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RNF8O76064 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF8O76064 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms