Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NPHP1O15259 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NPHP1O15259 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.61■□□□□ 0.73
NPHP1O15259 AC018892.3-201ENST00000623986 2499 ntBASIC19.61■□□□□ 0.73
NPHP1O15259 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.61■□□□□ 0.73
NPHP1O15259 CNN2P8-201ENST00000421872 913 ntBASIC19.61■□□□□ 0.73
NPHP1O15259 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.61■□□□□ 0.73
NPHP1O15259 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.61■□□□□ 0.73
NPHP1O15259 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.61■□□□□ 0.73
NPHP1O15259 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.61■□□□□ 0.73
NPHP1O15259 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.61■□□□□ 0.73
NPHP1O15259 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.61■□□□□ 0.73
NPHP1O15259 AC025279.2-201ENST00000569730 653 ntBASIC19.61■□□□□ 0.73
NPHP1O15259 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.61■□□□□ 0.73
NPHP1O15259 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.61■□□□□ 0.73
NPHP1O15259 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.61■□□□□ 0.73
NPHP1O15259 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.61■□□□□ 0.73
NPHP1O15259 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.61■□□□□ 0.73
NPHP1O15259 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NPHP1O15259 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.61■□□□□ 0.73
NPHP1O15259 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPHP1O15259 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.61■□□□□ 0.73
NPHP1O15259 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.6■□□□□ 0.73
NPHP1O15259 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
NPHP1O15259 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC19.6■□□□□ 0.73
NPHP1O15259 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.6■□□□□ 0.73
NPHP1O15259 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.6■□□□□ 0.73
NPHP1O15259 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NPHP1O15259 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NPHP1O15259 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.6■□□□□ 0.73
NPHP1O15259 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.6■□□□□ 0.73
NPHP1O15259 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.6■□□□□ 0.73
NPHP1O15259 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.6■□□□□ 0.73
NPHP1O15259 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.6■□□□□ 0.73
NPHP1O15259 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 AP005019.2-201ENST00000615104 511 ntBASIC19.6■□□□□ 0.73
NPHP1O15259 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.6■□□□□ 0.73
NPHP1O15259 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NPHP1O15259 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NPHP1O15259 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.6■□□□□ 0.73
NPHP1O15259 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPHP1O15259 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.6■□□□□ 0.73
NPHP1O15259 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.6■□□□□ 0.73
NPHP1O15259 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NPHP1O15259 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NPHP1O15259 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.59■□□□□ 0.73
NPHP1O15259 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NPHP1O15259 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 AHCYP2-201ENST00000430630 1300 ntBASIC19.59■□□□□ 0.73
NPHP1O15259 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
NPHP1O15259 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.59■□□□□ 0.73
NPHP1O15259 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.59■□□□□ 0.73
NPHP1O15259 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.59■□□□□ 0.73
NPHP1O15259 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.59■□□□□ 0.73
NPHP1O15259 SLC25A24P2-201ENST00000415059 510 ntBASIC19.59■□□□□ 0.73
NPHP1O15259 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.59■□□□□ 0.73
NPHP1O15259 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPHP1O15259 AC078819.1-201ENST00000547454 765 ntBASIC19.59■□□□□ 0.73
NPHP1O15259 AC012085.1-201ENST00000548270 765 ntBASIC19.59■□□□□ 0.73
NPHP1O15259 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.59■□□□□ 0.73
NPHP1O15259 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.59■□□□□ 0.73
NPHP1O15259 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.59■□□□□ 0.73
NPHP1O15259 AC097359.3-201ENST00000603982 1210 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms