Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TKT-202ENST00000423516 2075 ntTSL 2 BASIC24.31■■□□□ 1.48
CHD1O14646 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC24.31■■□□□ 1.48
CHD1O14646 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1O14646 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1O14646 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC24.3■■□□□ 1.48
CHD1O14646 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CHD1O14646 AC108734.2-201ENST00000420887 1069 ntBASIC24.3■■□□□ 1.48
CHD1O14646 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC24.3■■□□□ 1.48
CHD1O14646 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1O14646 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC24.3■■□□□ 1.48
CHD1O14646 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CHD1O14646 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1O14646 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD1O14646 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD1O14646 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1O14646 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD1O14646 SKA2-202ENST00000437036 625 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD1O14646 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1O14646 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC24.3■■□□□ 1.48
CHD1O14646 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD1O14646 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1O14646 AL645608.8-201ENST00000606034 2086 ntBASIC24.29■■□□□ 1.48
CHD1O14646 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1O14646 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1O14646 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC24.29■■□□□ 1.48
CHD1O14646 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1O14646 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1O14646 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1O14646 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC24.29■■□□□ 1.48
CHD1O14646 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
CHD1O14646 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CHD1O14646 NME4-203ENST00000397722 1232 ntTSL 2 BASIC24.29■■□□□ 1.48
CHD1O14646 CISD2-202ENST00000503643 808 ntTSL 2 BASIC24.29■■□□□ 1.48
CHD1O14646 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC24.29■■□□□ 1.48
CHD1O14646 AP000322.3-201ENST00000608665 388 ntBASIC24.29■■□□□ 1.48
CHD1O14646 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
CHD1O14646 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC24.29■■□□□ 1.48
CHD1O14646 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1O14646 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
CHD1O14646 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1O14646 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1O14646 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC24.28■■□□□ 1.48
CHD1O14646 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
CHD1O14646 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC24.28■■□□□ 1.48
CHD1O14646 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1O14646 AL672207.1-201ENST00000328462 1570 ntBASIC24.28■■□□□ 1.48
CHD1O14646 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1O14646 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC24.28■■□□□ 1.48
CHD1O14646 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1O14646 AP005264.6-204ENST00000588436 719 ntBASIC24.28■■□□□ 1.48
CHD1O14646 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC24.28■■□□□ 1.48
CHD1O14646 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1O14646 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1O14646 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CHD1O14646 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1O14646 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1O14646 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1O14646 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1O14646 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
CHD1O14646 KRT18P46-201ENST00000435568 1279 ntBASIC24.27■■□□□ 1.48
CHD1O14646 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC24.27■■□□□ 1.48
CHD1O14646 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD1O14646 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC24.27■■□□□ 1.48
CHD1O14646 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD1O14646 USB1-205ENST00000561743 1135 ntTSL 3 BASIC24.27■■□□□ 1.48
CHD1O14646 MIR2392-201ENST00000584881 84 ntBASIC24.27■■□□□ 1.48
CHD1O14646 AC021016.3-201ENST00000608367 477 ntBASIC24.27■■□□□ 1.48
CHD1O14646 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC24.27■■□□□ 1.48
CHD1O14646 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1O14646 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD1O14646 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC24.27■■□□□ 1.48
CHD1O14646 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
CHD1O14646 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1O14646 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1O14646 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1O14646 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1O14646 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
CHD1O14646 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD1O14646 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CHD1O14646 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1O14646 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1O14646 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
CHD1O14646 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD1O14646 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
CHD1O14646 CICP12-201ENST00000455801 843 ntBASIC24.27■■□□□ 1.48
CHD1O14646 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CHD1O14646 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1O14646 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
CHD1O14646 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1O14646 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1O14646 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CHD1O14646 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CHD1O14646 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1O14646 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1O14646 PTGER4P2-201ENST00000328411 252 ntBASIC24.26■■□□□ 1.47
CHD1O14646 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC24.26■■□□□ 1.47
CHD1O14646 PTGER4P3-201ENST00000458150 252 ntBASIC24.26■■□□□ 1.47
CHD1O14646 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC24.26■■□□□ 1.47
CHD1O14646 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC24.26■■□□□ 1.47
CHD1O14646 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms