Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 AC068587.3-201ENST00000526613 355 ntBASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 AL359711.2-201ENST00000563105 872 ntBASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 MIR4538-201ENST00000581377 78 ntBASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 MIR6869-201ENST00000619434 62 ntBASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 AC022532.1-201ENST00000624563 1728 ntBASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 MIR1908-201ENST00000410394 80 ntBASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 RPL7P3-201ENST00000441388 714 ntBASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 TARDBPP1-201ENST00000442013 1203 ntBASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 AC009486.1-201ENST00000569860 813 ntBASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 AL592424.1-201ENST00000563624 1536 ntBASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA9Q9Y5G4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 INTS4P2-202ENST00000614726 2019 ntBASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AC074338.1-201ENST00000416825 156 ntBASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AC099336.1-201ENST00000417053 1171 ntBASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AL355864.2-201ENST00000447420 863 ntBASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 CSF2RBP1-201ENST00000447905 391 ntBASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms