Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.87■□□□□ 0.93
PHF8Q9UPP1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 IQSEC3P1-201ENST00000538799 536 ntBASIC20.86■□□□□ 0.93
PHF8Q9UPP1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 AC103988.2-201ENST00000561804 725 ntBASIC20.86■□□□□ 0.93
PHF8Q9UPP1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 RN7SL555P-201ENST00000584742 339 ntBASIC20.86■□□□□ 0.93
PHF8Q9UPP1 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 AP003419.4-201ENST00000616071 517 ntBASIC20.86■□□□□ 0.93
PHF8Q9UPP1 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 AP000593.2-201ENST00000542775 1433 ntBASIC20.86■□□□□ 0.93
PHF8Q9UPP1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF8Q9UPP1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 FKBP4P6-201ENST00000457486 1332 ntBASIC20.85■□□□□ 0.93
PHF8Q9UPP1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 AC020922.3-201ENST00000595064 547 ntBASIC20.85■□□□□ 0.93
PHF8Q9UPP1 AC009955.4-201ENST00000597192 544 ntBASIC20.85■□□□□ 0.93
PHF8Q9UPP1 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 AL157791.1-201ENST00000553667 1699 ntBASIC20.85■□□□□ 0.93
PHF8Q9UPP1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.85■□□□□ 0.93
PHF8Q9UPP1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 AC026434.2-201ENST00000506094 1078 ntBASIC20.84■□□□□ 0.93
PHF8Q9UPP1 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 AC090164.2-201ENST00000611487 516 ntBASIC20.84■□□□□ 0.93
PHF8Q9UPP1 AL136301.1-201ENST00000615830 422 ntBASIC20.84■□□□□ 0.93
PHF8Q9UPP1 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 LINC02447-202ENST00000501888 2146 ntBASIC20.84■□□□□ 0.93
PHF8Q9UPP1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHF8Q9UPP1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms