Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 AGGF1P2-201ENST00000426656 2106 ntBASIC14.27□□□□□ -0.12
DKK4Q9UBT3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DKK4Q9UBT3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 AL022344.2-201ENST00000568976 968 ntBASIC14.27□□□□□ -0.13
DKK4Q9UBT3 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.27□□□□□ -0.13
DKK4Q9UBT3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 AP000593.2-201ENST00000542775 1433 ntBASIC14.26□□□□□ -0.13
DKK4Q9UBT3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 FAM90A2P-201ENST00000511144 1395 ntBASIC14.26□□□□□ -0.13
DKK4Q9UBT3 FAM90A25P-201ENST00000528404 1395 ntBASIC14.26□□□□□ -0.13
DKK4Q9UBT3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 AC011477.6-201ENST00000604980 1927 ntBASIC14.26□□□□□ -0.13
DKK4Q9UBT3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 AC239868.1-201ENST00000369385 493 ntBASIC14.26□□□□□ -0.13
DKK4Q9UBT3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 AC079112.1-201ENST00000454972 939 ntBASIC14.26□□□□□ -0.13
DKK4Q9UBT3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 AC010234.1-201ENST00000494599 870 ntBASIC14.26□□□□□ -0.13
DKK4Q9UBT3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 MIR4783-201ENST00000580343 82 ntBASIC14.26□□□□□ -0.13
DKK4Q9UBT3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 AL645728.2-202ENST00000641679 227 ntBASIC14.26□□□□□ -0.13
DKK4Q9UBT3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 AL158070.2-201ENST00000623713 1621 ntBASIC14.26□□□□□ -0.13
DKK4Q9UBT3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DKK4Q9UBT3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DKK4Q9UBT3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.25□□□□□ -0.13
DKK4Q9UBT3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms