Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 KRT8P13-201ENST00000463294 1010 ntBASIC15.59■□□□□ 0.09
HMGB4Q8WW32 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 GAPDHP40-201ENST00000505218 1006 ntBASIC15.59■□□□□ 0.09
HMGB4Q8WW32 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGB4Q8WW32 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGB4Q8WW32 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGB4Q8WW32 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.58■□□□□ 0.09
HMGB4Q8WW32 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HMGB4Q8WW32 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.58■□□□□ 0.09
HMGB4Q8WW32 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HMGB4Q8WW32 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 AL138709.1-201ENST00000614840 1693 ntBASIC15.58■□□□□ 0.08
HMGB4Q8WW32 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 BTBD6P1-201ENST00000412176 1267 ntBASIC15.58■□□□□ 0.08
HMGB4Q8WW32 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGB4Q8WW32 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 AC007969.1-201ENST00000433675 447 ntBASIC15.57■□□□□ 0.08
HMGB4Q8WW32 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 RNA5SP486-201ENST00000515961 83 ntBASIC15.57■□□□□ 0.08
HMGB4Q8WW32 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 AP001258.2-201ENST00000529891 490 ntBASIC15.57■□□□□ 0.08
HMGB4Q8WW32 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 AC132938.4-201ENST00000623835 848 ntBASIC15.57■□□□□ 0.08
HMGB4Q8WW32 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGB4Q8WW32 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms