Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 LINC02447-202ENST00000501888 2146 ntBASIC18.62■□□□□ 0.57
SNED1Q8TER0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 RN7SKP175-201ENST00000408472 289 ntBASIC18.62■□□□□ 0.57
SNED1Q8TER0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 AC104784.1-201ENST00000473096 294 ntBASIC18.62■□□□□ 0.57
SNED1Q8TER0 AC106794.1-201ENST00000506935 792 ntBASIC18.62■□□□□ 0.57
SNED1Q8TER0 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 MIR7845-201ENST00000618396 99 ntBASIC18.62■□□□□ 0.57
SNED1Q8TER0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 AC079328.2-201ENST00000561241 3354 ntBASIC18.62■□□□□ 0.57
SNED1Q8TER0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 AC004899.1-201ENST00000424687 1714 ntBASIC18.62■□□□□ 0.57
SNED1Q8TER0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNED1Q8TER0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.62■□□□□ 0.57
SNED1Q8TER0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.61■□□□□ 0.57
SNED1Q8TER0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.61■□□□□ 0.57
SNED1Q8TER0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SNED1Q8TER0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 GHSR-202ENST00000427970 912 ntBASIC18.61■□□□□ 0.57
SNED1Q8TER0 AC012618.1-201ENST00000461223 412 ntBASIC18.61■□□□□ 0.57
SNED1Q8TER0 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 AC125604.1-201ENST00000496255 707 ntBASIC18.61■□□□□ 0.57
SNED1Q8TER0 MIR4683-201ENST00000579659 81 ntBASIC18.61■□□□□ 0.57
SNED1Q8TER0 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 AL805961.1-203ENST00000641078 1258 ntBASIC18.61■□□□□ 0.57
SNED1Q8TER0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SNED1Q8TER0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.61■□□□□ 0.57
SNED1Q8TER0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.61■□□□□ 0.57
SNED1Q8TER0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.61■□□□□ 0.57
SNED1Q8TER0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNED1Q8TER0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SNED1Q8TER0 AL603832.2-201ENST00000566195 2125 ntBASIC18.61■□□□□ 0.57
SNED1Q8TER0 AC055811.4-201ENST00000624039 1754 ntBASIC18.61■□□□□ 0.57
SNED1Q8TER0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 AC004923.1-202ENST00000642106 209 ntBASIC18.6■□□□□ 0.57
SNED1Q8TER0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.6■□□□□ 0.57
SNED1Q8TER0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNED1Q8TER0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms