Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 AL162726.2-201ENST00000438986 1017 ntBASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 MIR5189-201ENST00000577370 114 ntBASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 ACTG1P3-201ENST00000431775 1114 ntBASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 AC133539.2-201ENST00000604757 467 ntBASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 CU634019.7-201ENST00000624153 1185 ntBASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 FP236241.2-201ENST00000624906 1185 ntBASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.12■□□□□ 0.17
PHTF2Q8N3S3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHTF2Q8N3S3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms