Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 AC079776.1-201ENST00000401540 1152 ntBASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 ACTG1P3-201ENST00000431775 1114 ntBASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 AC026410.3-201ENST00000514280 936 ntBASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 SLC25A47P1-201ENST00000531577 414 ntBASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 AC234783.1-201ENST00000441761 496 ntBASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 CROCCP4-201ENST00000457096 498 ntBASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 AP001582.1-201ENST00000525856 295 ntBASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 BTNL10-201ENST00000595971 695 ntBASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 AL359881.2-201ENST00000602973 570 ntBASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 AC017083.2-201ENST00000608069 979 ntBASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 AP005117.1-202ENST00000581724 1908 ntBASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN4BQ8IWT1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SCN4BQ8IWT1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SCN4BQ8IWT1 AC018665.1-201ENST00000622927 1362 ntBASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms