Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 AHCYP2-201ENST00000430630 1300 ntBASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 AC007969.1-201ENST00000433675 447 ntBASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 AC114812.1-204ENST00000449669 728 ntBASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 AC078819.1-201ENST00000547454 765 ntBASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 AC012085.1-201ENST00000548270 765 ntBASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 AC106872.11-201ENST00000605838 421 ntBASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 AL008638.5-201ENST00000623814 1298 ntBASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC149Q6ZUS6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 RNA5SP423-201ENST00000517127 109 ntBASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 MIR4741-201ENST00000579822 90 ntBASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 AC025181.2-201ENST00000606994 802 ntBASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 AL118508.1-201ENST00000613502 2345 ntBASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms