Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 AC007274.2-201ENST00000421675 662 ntBASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 LDHBP1-201ENST00000455730 1119 ntBASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 MESTP3-201ENST00000503460 968 ntBASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNKSR3Q6P9H4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 CROCCP1-201ENST00000426910 5675 ntBASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 AC104457.1-201ENST00000401024 814 ntBASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 ACTG1P2-201ENST00000415776 1125 ntBASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 ACTG1P11-201ENST00000425411 1125 ntBASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 EEF1DP6-201ENST00000449232 372 ntBASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 RNMTL1P1-201ENST00000454103 560 ntBASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 TUBB8P8-201ENST00000458717 1058 ntBASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 AL161670.2-201ENST00000557650 1227 ntBASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 RN7SL163P-201ENST00000583100 276 ntBASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 AC004923.1-202ENST00000642106 209 ntBASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNKSR3Q6P9H4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNKSR3Q6P9H4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CNKSR3Q6P9H4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNKSR3Q6P9H4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNKSR3Q6P9H4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNKSR3Q6P9H4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNKSR3Q6P9H4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNKSR3Q6P9H4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.52■□□□□ 0.23
CNKSR3Q6P9H4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CNKSR3Q6P9H4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 AC080080.1-201ENST00000625121 2420 ntBASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms