Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC073150.1-201ENST00000450406 1084 ntBASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 RN7SL163P-201ENST00000583100 276 ntBASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 NAP1L6-202ENST00000641404 1222 ntBASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 KRT8P21-201ENST00000430398 1491 ntBASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 SHC1P1-201ENST00000425230 1745 ntBASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 AC006335.1-201ENST00000445200 547 ntBASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 AC005357.2-202ENST00000590507 1060 ntBASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 AL596087.1-201ENST00000400979 1969 ntBASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13DQ5THJ4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC127383.1-201ENST00000444697 1800 ntBASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC078991.1-201ENST00000437297 610 ntBASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 LINC01165-201ENST00000445190 1623 ntBASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 FAM90A7P-201ENST00000382628 1395 ntBASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 FAM90A23P-201ENST00000400136 1395 ntBASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 MIR4750-201ENST00000584564 56 ntBASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC015909.3-201ENST00000572855 1794 ntBASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC079328.2-201ENST00000561241 3354 ntBASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 PCDHA14-201ENST00000506751 2298 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms