Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGNL1Q0VF96 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC21■□□□□ 0.95
CGNL1Q0VF96 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CGNL1Q0VF96 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC21■□□□□ 0.95
CGNL1Q0VF96 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC21■□□□□ 0.95
CGNL1Q0VF96 AC007787.1-201ENST00000588095 1583 ntBASIC21■□□□□ 0.95
CGNL1Q0VF96 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 TUBB1P2-201ENST00000422712 1306 ntBASIC21■□□□□ 0.95
CGNL1Q0VF96 TUBB1P1-201ENST00000503144 1300 ntBASIC21■□□□□ 0.95
CGNL1Q0VF96 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC21■□□□□ 0.95
CGNL1Q0VF96 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC21■□□□□ 0.95
CGNL1Q0VF96 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CGNL1Q0VF96 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC21■□□□□ 0.95
CGNL1Q0VF96 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC21■□□□□ 0.95
CGNL1Q0VF96 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CGNL1Q0VF96 AC104457.1-201ENST00000401024 814 ntBASIC21■□□□□ 0.95
CGNL1Q0VF96 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC21■□□□□ 0.95
CGNL1Q0VF96 NUS1P3-201ENST00000423502 862 ntBASIC21■□□□□ 0.95
CGNL1Q0VF96 ACTBP11-201ENST00000436287 1126 ntBASIC21■□□□□ 0.95
CGNL1Q0VF96 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC21■□□□□ 0.95
CGNL1Q0VF96 FO681548.1-201ENST00000455617 1132 ntBASIC21■□□□□ 0.95
CGNL1Q0VF96 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CGNL1Q0VF96 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CGNL1Q0VF96 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 RNA5SP412-201ENST00000516234 123 ntBASIC21■□□□□ 0.95
CGNL1Q0VF96 AP000812.2-201ENST00000538934 718 ntBASIC21■□□□□ 0.95
CGNL1Q0VF96 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 TECR-220ENST00000600083 1204 ntTSL 2 BASIC21■□□□□ 0.95
CGNL1Q0VF96 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CGNL1Q0VF96 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CGNL1Q0VF96 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 KRT8P35-201ENST00000483942 1338 ntBASIC20.99■□□□□ 0.95
CGNL1Q0VF96 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.99■□□□□ 0.95
CGNL1Q0VF96 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 AL645937.2-201ENST00000396808 931 ntBASIC20.99■□□□□ 0.95
CGNL1Q0VF96 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 ACTBP8-201ENST00000403258 1108 ntBASIC20.99■□□□□ 0.95
CGNL1Q0VF96 KLF2P2-201ENST00000416807 1039 ntBASIC20.99■□□□□ 0.95
CGNL1Q0VF96 RPL7P3-201ENST00000441388 714 ntBASIC20.99■□□□□ 0.95
CGNL1Q0VF96 AC007551.1-201ENST00000457394 519 ntBASIC20.99■□□□□ 0.95
CGNL1Q0VF96 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 INO80C-210ENST00000590757 595 ntTSL 2 BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CGNL1Q0VF96 AC105917.1-201ENST00000506637 2539 ntBASIC20.99■□□□□ 0.95
CGNL1Q0VF96 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms