Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 ALOX12P2-203ENST00000570921 1945 ntBASIC17.14■□□□□ 0.33
CDK7P50613 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 KRT8P19-201ENST00000551916 1455 ntBASIC17.14■□□□□ 0.33
CDK7P50613 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDK7P50613 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDK7P50613 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.14■□□□□ 0.33
CDK7P50613 KLF2P2-201ENST00000416807 1039 ntBASIC17.14■□□□□ 0.33
CDK7P50613 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.14■□□□□ 0.33
CDK7P50613 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.14■□□□□ 0.33
CDK7P50613 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.14■□□□□ 0.33
CDK7P50613 RN7SL769P-201ENST00000469386 295 ntBASIC17.14■□□□□ 0.33
CDK7P50613 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CDK7P50613 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.14■□□□□ 0.33
CDK7P50613 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.14■□□□□ 0.33
CDK7P50613 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDK7P50613 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.14■□□□□ 0.33
CDK7P50613 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.14■□□□□ 0.33
CDK7P50613 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 ECM1P1-201ENST00000604092 1279 ntBASIC17.14■□□□□ 0.33
CDK7P50613 AL451050.2-201ENST00000606967 682 ntBASIC17.14■□□□□ 0.33
CDK7P50613 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.14■□□□□ 0.33
CDK7P50613 AC138627.1-207ENST00000641560 1006 ntBASIC17.14■□□□□ 0.33
CDK7P50613 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDK7P50613 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 LINC02199-201ENST00000506655 2702 ntBASIC17.14■□□□□ 0.33
CDK7P50613 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDK7P50613 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.13■□□□□ 0.33
CDK7P50613 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.13■□□□□ 0.33
CDK7P50613 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK7P50613 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK7P50613 CROCCP1-201ENST00000426910 5675 ntBASIC17.13■□□□□ 0.33
CDK7P50613 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.13■□□□□ 0.33
CDK7P50613 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK7P50613 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDK7P50613 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.13■□□□□ 0.33
CDK7P50613 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK7P50613 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDK7P50613 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK7P50613 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDK7P50613 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDK7P50613 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDK7P50613 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDK7P50613 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CDK7P50613 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.13■□□□□ 0.33
CDK7P50613 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK7P50613 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDK7P50613 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.13■□□□□ 0.33
CDK7P50613 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDK7P50613 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDK7P50613 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.13■□□□□ 0.33
CDK7P50613 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.13■□□□□ 0.33
CDK7P50613 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK7P50613 PRSS30P-206ENST00000641773 873 ntBASIC17.13■□□□□ 0.33
CDK7P50613 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDK7P50613 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK7P50613 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK7P50613 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDK7P50613 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK7P50613 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
CDK7P50613 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK7P50613 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK7P50613 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 RNU1-114P-201ENST00000365297 166 ntBASIC17.12■□□□□ 0.33
CDK7P50613 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.12■□□□□ 0.33
CDK7P50613 NUS1P3-201ENST00000423502 862 ntBASIC17.12■□□□□ 0.33
CDK7P50613 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.12■□□□□ 0.33
CDK7P50613 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.12■□□□□ 0.33
CDK7P50613 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.12■□□□□ 0.33
CDK7P50613 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDK7P50613 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms