Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1DP48730 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CSNK1DP48730 AL035252.4-201ENST00000624174 288 ntBASIC15.55■□□□□ 0.08
CSNK1DP48730 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.55■□□□□ 0.08
CSNK1DP48730 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1DP48730 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1DP48730 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1DP48730 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CSNK1DP48730 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1DP48730 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1DP48730 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1DP48730 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1DP48730 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1DP48730 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1DP48730 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1DP48730 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CSNK1DP48730 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.54■□□□□ 0.08
CSNK1DP48730 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
CSNK1DP48730 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1DP48730 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CSNK1DP48730 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1DP48730 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1DP48730 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CSNK1DP48730 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CSNK1DP48730 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.54■□□□□ 0.08
CSNK1DP48730 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.54■□□□□ 0.08
CSNK1DP48730 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.54■□□□□ 0.08
CSNK1DP48730 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.54■□□□□ 0.08
CSNK1DP48730 TTTY23B-201ENST00000442790 549 ntBASIC15.54■□□□□ 0.08
CSNK1DP48730 AC114812.1-204ENST00000449669 728 ntBASIC15.54■□□□□ 0.08
CSNK1DP48730 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CSNK1DP48730 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.54■□□□□ 0.08
CSNK1DP48730 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CSNK1DP48730 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 PTP4A1P2-201ENST00000546033 454 ntBASIC15.54■□□□□ 0.08
CSNK1DP48730 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.54■□□□□ 0.08
CSNK1DP48730 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1DP48730 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CSNK1DP48730 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CSNK1DP48730 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.54■□□□□ 0.08
CSNK1DP48730 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.54■□□□□ 0.08
CSNK1DP48730 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSNK1DP48730 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.54■□□□□ 0.08
CSNK1DP48730 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1DP48730 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CSNK1DP48730 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1DP48730 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CSNK1DP48730 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1DP48730 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1DP48730 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CSNK1DP48730 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CSNK1DP48730 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1DP48730 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
CSNK1DP48730 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
CSNK1DP48730 BAATP1-201ENST00000412284 1225 ntBASIC15.53■□□□□ 0.08
CSNK1DP48730 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1DP48730 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.53■□□□□ 0.08
CSNK1DP48730 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1DP48730 AC106886.1-201ENST00000568660 600 ntBASIC15.53■□□□□ 0.08
CSNK1DP48730 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1DP48730 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1DP48730 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1DP48730 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1DP48730 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1DP48730 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.53■□□□□ 0.08
CSNK1DP48730 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.53■□□□□ 0.08
CSNK1DP48730 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.53■□□□□ 0.08
CSNK1DP48730 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSNK1DP48730 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1DP48730 AC012508.2-201ENST00000567613 1472 ntBASIC15.52■□□□□ 0.08
CSNK1DP48730 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1DP48730 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1DP48730 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CSNK1DP48730 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1DP48730 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.52■□□□□ 0.08
CSNK1DP48730 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSNK1DP48730 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms