Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ATRXP46100 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ATRXP46100 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATRXP46100 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
ATRXP46100 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ATRXP46100 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.06□□□□□ -0.16
ATRXP46100 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.06□□□□□ -0.16
ATRXP46100 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.06□□□□□ -0.16
ATRXP46100 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
ATRXP46100 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.06□□□□□ -0.16
ATRXP46100 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
ATRXP46100 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ATRXP46100 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATRXP46100 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.05□□□□□ -0.16
ATRXP46100 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ATRXP46100 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 NHP2P1-201ENST00000335274 462 ntBASIC14.05□□□□□ -0.16
ATRXP46100 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.05□□□□□ -0.16
ATRXP46100 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.05□□□□□ -0.16
ATRXP46100 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ATRXP46100 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ATRXP46100 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ATRXP46100 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.05□□□□□ -0.16
ATRXP46100 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.05□□□□□ -0.16
ATRXP46100 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ATRXP46100 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.05□□□□□ -0.16
ATRXP46100 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ATRXP46100 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 AP000356.3-201ENST00000382243 753 ntBASIC14.05□□□□□ -0.16
ATRXP46100 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ATRXP46100 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 RN7SL396P-201ENST00000471086 295 ntBASIC14.05□□□□□ -0.16
ATRXP46100 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.05□□□□□ -0.16
ATRXP46100 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.05□□□□□ -0.16
ATRXP46100 AC073592.2-201ENST00000623062 780 ntBASIC14.05□□□□□ -0.16
ATRXP46100 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 AC138932.1-201ENST00000534164 6830 ntBASIC14.05□□□□□ -0.16
ATRXP46100 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATRXP46100 AC060834.1-201ENST00000443027 2032 ntBASIC14.04□□□□□ -0.16
ATRXP46100 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ATRXP46100 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATRXP46100 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATRXP46100 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
ATRXP46100 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ATRXP46100 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.04□□□□□ -0.16
ATRXP46100 AQP7P5-201ENST00000428759 1049 ntBASIC14.04□□□□□ -0.16
ATRXP46100 AQP7P4-201ENST00000447083 1042 ntBASIC14.04□□□□□ -0.16
ATRXP46100 AQP7P2-201ENST00000453967 1041 ntBASIC14.04□□□□□ -0.16
ATRXP46100 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ATRXP46100 AP003398.1-201ENST00000531124 318 ntBASIC14.04□□□□□ -0.16
ATRXP46100 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.04□□□□□ -0.16
ATRXP46100 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.04□□□□□ -0.16
ATRXP46100 HMGB1P24-201ENST00000611897 328 ntBASIC14.04□□□□□ -0.16
ATRXP46100 AQP7P3-201ENST00000624547 1041 ntBASIC14.04□□□□□ -0.16
ATRXP46100 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATRXP46100 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATRXP46100 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ATRXP46100 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATRXP46100 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.04□□□□□ -0.16
ATRXP46100 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.04□□□□□ -0.16
ATRXP46100 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ATRXP46100 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATRXP46100 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.04□□□□□ -0.16
ATRXP46100 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.04□□□□□ -0.16
ATRXP46100 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ATRXP46100 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms