Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.37□□□□□ -0.11
ABCD3P28288 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.37□□□□□ -0.11
ABCD3P28288 AC104596.2-201ENST00000512793 793 ntBASIC14.37□□□□□ -0.11
ABCD3P28288 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.37□□□□□ -0.11
ABCD3P28288 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.37□□□□□ -0.11
ABCD3P28288 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.37□□□□□ -0.11
ABCD3P28288 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.37□□□□□ -0.11
ABCD3P28288 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.37□□□□□ -0.11
ABCD3P28288 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
ABCD3P28288 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ABCD3P28288 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.37□□□□□ -0.11
ABCD3P28288 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.37□□□□□ -0.11
ABCD3P28288 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ABCD3P28288 AC136621.1-201ENST00000624017 2304 ntBASIC14.37□□□□□ -0.11
ABCD3P28288 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.37□□□□□ -0.11
ABCD3P28288 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ABCD3P28288 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ABCD3P28288 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ABCD3P28288 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.37□□□□□ -0.11
ABCD3P28288 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ABCD3P28288 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ABCD3P28288 SSR4P1-203ENST00000599569 2260 ntBASIC14.36□□□□□ -0.11
ABCD3P28288 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ABCD3P28288 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ABCD3P28288 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.36□□□□□ -0.11
ABCD3P28288 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.36□□□□□ -0.11
ABCD3P28288 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.36□□□□□ -0.11
ABCD3P28288 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.36□□□□□ -0.11
ABCD3P28288 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 MYCLP2-201ENST00000449268 967 ntBASIC14.36□□□□□ -0.11
ABCD3P28288 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.36□□□□□ -0.11
ABCD3P28288 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.36□□□□□ -0.11
ABCD3P28288 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.36□□□□□ -0.11
ABCD3P28288 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 TP53TG3HP-202ENST00000569755 579 ntBASIC14.36□□□□□ -0.11
ABCD3P28288 AC008494.3-201ENST00000606615 944 ntBASIC14.36□□□□□ -0.11
ABCD3P28288 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
ABCD3P28288 MIR8072-201ENST00000614241 80 ntBASIC14.36□□□□□ -0.11
ABCD3P28288 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.36□□□□□ -0.11
ABCD3P28288 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.36□□□□□ -0.11
ABCD3P28288 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.36□□□□□ -0.11
ABCD3P28288 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
ABCD3P28288 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.36□□□□□ -0.11
ABCD3P28288 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCD3P28288 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.35□□□□□ -0.11
ABCD3P28288 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.35□□□□□ -0.11
ABCD3P28288 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ABCD3P28288 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.35□□□□□ -0.11
ABCD3P28288 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ABCD3P28288 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ABCD3P28288 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 AC098850.1-201ENST00000419919 790 ntBASIC14.35□□□□□ -0.11
ABCD3P28288 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.35□□□□□ -0.11
ABCD3P28288 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms