Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.93□□□□□ -0.18
CNOT4O95628 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CNOT4O95628 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.93□□□□□ -0.18
CNOT4O95628 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.93□□□□□ -0.18
CNOT4O95628 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.93□□□□□ -0.18
CNOT4O95628 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 IGHV3-71-201ENST00000523324 359 ntBASIC13.93□□□□□ -0.18
CNOT4O95628 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
CNOT4O95628 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
CNOT4O95628 RARRES2P5-201ENST00000564013 466 ntBASIC13.93□□□□□ -0.18
CNOT4O95628 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 AL132655.2-201ENST00000596276 594 ntBASIC13.93□□□□□ -0.18
CNOT4O95628 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.93□□□□□ -0.18
CNOT4O95628 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CNOT4O95628 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 SLC7A15P-201ENST00000424028 1363 ntBASIC13.93□□□□□ -0.18
CNOT4O95628 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.93□□□□□ -0.18
CNOT4O95628 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.93□□□□□ -0.18
CNOT4O95628 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.93□□□□□ -0.18
CNOT4O95628 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CNOT4O95628 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CNOT4O95628 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CNOT4O95628 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CNOT4O95628 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.92□□□□□ -0.18
CNOT4O95628 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CNOT4O95628 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CNOT4O95628 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
CNOT4O95628 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CNOT4O95628 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.92□□□□□ -0.18
CNOT4O95628 U91328.1-201ENST00000437528 223 ntBASIC13.92□□□□□ -0.18
CNOT4O95628 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.92□□□□□ -0.18
CNOT4O95628 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.92□□□□□ -0.18
CNOT4O95628 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.92□□□□□ -0.18
CNOT4O95628 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.92□□□□□ -0.18
CNOT4O95628 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.92□□□□□ -0.18
CNOT4O95628 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CNOT4O95628 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CNOT4O95628 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CNOT4O95628 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CNOT4O95628 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.92□□□□□ -0.18
CNOT4O95628 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.92□□□□□ -0.18
CNOT4O95628 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CNOT4O95628 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.92□□□□□ -0.18
CNOT4O95628 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CNOT4O95628 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CNOT4O95628 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CNOT4O95628 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CNOT4O95628 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT4O95628 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CNOT4O95628 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CNOT4O95628 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CNOT4O95628 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms