Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
OPHN1O60890 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.36■□□□□ 0.21
OPHN1O60890 AC020658.6-201ENST00000623564 1870 ntBASIC16.36■□□□□ 0.21
OPHN1O60890 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.36■□□□□ 0.21
OPHN1O60890 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
OPHN1O60890 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.36■□□□□ 0.21
OPHN1O60890 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.36■□□□□ 0.21
OPHN1O60890 AL139010.1-201ENST00000454878 894 ntBASIC16.36■□□□□ 0.21
OPHN1O60890 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.36■□□□□ 0.21
OPHN1O60890 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.36■□□□□ 0.21
OPHN1O60890 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.36■□□□□ 0.21
OPHN1O60890 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.36■□□□□ 0.21
OPHN1O60890 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.36■□□□□ 0.21
OPHN1O60890 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.36■□□□□ 0.21
OPHN1O60890 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.36■□□□□ 0.21
OPHN1O60890 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
OPHN1O60890 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.36■□□□□ 0.21
OPHN1O60890 REXO1L1P-202ENST00000608646 1974 ntBASIC16.36■□□□□ 0.21
OPHN1O60890 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
OPHN1O60890 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.36■□□□□ 0.21
OPHN1O60890 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
OPHN1O60890 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
OPHN1O60890 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.35■□□□□ 0.21
OPHN1O60890 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.35■□□□□ 0.21
OPHN1O60890 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.35■□□□□ 0.21
OPHN1O60890 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.35■□□□□ 0.21
OPHN1O60890 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.35■□□□□ 0.21
OPHN1O60890 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.35■□□□□ 0.21
OPHN1O60890 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.35■□□□□ 0.21
OPHN1O60890 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
OPHN1O60890 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.35■□□□□ 0.21
OPHN1O60890 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.35■□□□□ 0.21
OPHN1O60890 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.35■□□□□ 0.21
OPHN1O60890 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.35■□□□□ 0.21
OPHN1O60890 AL136982.4-201ENST00000437689 1740 ntBASIC16.35■□□□□ 0.21
OPHN1O60890 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
OPHN1O60890 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
OPHN1O60890 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.35■□□□□ 0.21
OPHN1O60890 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
OPHN1O60890 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.35■□□□□ 0.21
OPHN1O60890 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.35■□□□□ 0.21
OPHN1O60890 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.35■□□□□ 0.21
OPHN1O60890 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.35■□□□□ 0.21
OPHN1O60890 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OPHN1O60890 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
OPHN1O60890 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.34■□□□□ 0.21
OPHN1O60890 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
OPHN1O60890 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
OPHN1O60890 CICP13-201ENST00000422015 2789 ntBASIC16.34■□□□□ 0.21
OPHN1O60890 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.34■□□□□ 0.21
OPHN1O60890 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.34■□□□□ 0.21
OPHN1O60890 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.34■□□□□ 0.21
OPHN1O60890 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.34■□□□□ 0.21
OPHN1O60890 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 AC098614.1-201ENST00000368528 745 ntBASIC16.34■□□□□ 0.21
OPHN1O60890 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPHN1O60890 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
OPHN1O60890 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms