Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRICKLE3O43900 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PRICKLE3O43900 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRICKLE3O43900 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRICKLE3O43900 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
PRICKLE3O43900 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PRICKLE3O43900 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 AC104457.1-201ENST00000401024 814 ntBASIC14.93□□□□□ -0.02
PRICKLE3O43900 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 AC107373.2-201ENST00000607735 490 ntBASIC14.93□□□□□ -0.02
PRICKLE3O43900 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.93□□□□□ -0.02
PRICKLE3O43900 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRICKLE3O43900 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 FLJ16779-201ENST00000612722 7638 ntBASIC14.92□□□□□ -0.02
PRICKLE3O43900 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 COX5BP8-201ENST00000416911 349 ntBASIC14.92□□□□□ -0.02
PRICKLE3O43900 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 HLA-V-201ENST00000429037 534 ntBASIC14.92□□□□□ -0.02
PRICKLE3O43900 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 AC133539.2-201ENST00000604757 467 ntBASIC14.92□□□□□ -0.02
PRICKLE3O43900 AC093813.1-201ENST00000605066 256 ntBASIC14.92□□□□□ -0.02
PRICKLE3O43900 RPSAP52-203ENST00000622976 1023 ntBASIC14.92□□□□□ -0.02
PRICKLE3O43900 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 AL358472.5-202ENST00000641448 1267 ntBASIC14.92□□□□□ -0.02
PRICKLE3O43900 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms